The detailed information of tRNA gene sequence


Sequence ID>SRA1001074
Genome IDSRR001052.79700
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 116
End posion on genome 45
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnntagaat
tRNA gene sequence 
GTGTCTGTAACCTAATTGGGAAGGTGTCTGTTTTCGGAATAGGCAATAAGGGTTCGAGCC
CCTTTGGGCATTgtg
Downstream region at tRNA end position 
ttttatgaat
Secondary structure (Cloverleaf model)
>SRA1001074	Arg	TCG
                   t      Tgtg ttttatgaat
                     G + T
                     T - A
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          C G
                    T     T T C C C     A
      T A A        A      | | | | |     G
    T       T C C A       A A G G G     C
    G       | | | |                 T T
    G       A G G T
      G A          G     CAAT
                    T + G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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