The detailed information of tRNA gene sequence


Sequence ID>SRA1001078
Genome IDSRR001052.83871
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 17
End posion on genome 87
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgatttagg
tRNA gene sequence 
GCTCCTATGGTCTAGGGGTGGGACATTAGGTTTTCGACTTAAAGACAGGAGTTCGAGTCT
CTTTGGGAGTGttg
Downstream region at tRNA end position 
gagatatttg
Secondary structure (Cloverleaf model)
>SRA1001078	Glu	TTC
                   g      Gttg gagatatttg
                     G + T
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     T T C T C     A
        G A        G      | + | | |     G
      G     T C T G       A G G A G     C
      G     + | | |                 T T
      G     G G A C
        T G        A     AGAC
                    T - A
                    T - A
                    A - T
                    G + T
                    G - C
                  T       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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