The detailed information of tRNA gene sequence


Sequence ID>SRA1001111
Genome IDSRR001052.149055
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 122
End posion on genome 48
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
nnnnnnnncT
tRNA gene sequence 
TGACCTATAGCTCAATTGGGAGAGCATTTGCCTTCTAAGTAAGAGGTTGTAGGTTCGAGT
CCTACTAGGTTAGTtt
Downstream region at tRNA end position 
tataaaatat
Secondary structure (Cloverleaf model)
>SRA1001111	Arg	TCT
                   T      GTtt tataaaatat
                     T - A
                     G + T
                     A - T
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     AGGTT
                    T + G
                    T - A
                    T - A
                    G + T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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