The detailed information of tRNA gene sequence


Sequence ID>SRA1001129
Genome IDSRR001052.192983
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 48
End posion on genome 120
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aggcaggtaa
tRNA gene sequence 
CAGCGTTTAACTCAATTGGTAGAGTGTTGTGTTTACGCCACAAAAGTTGAAAGTTCGATT
CTTTTAGCGCTGAtag
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001129	Val	TAC
                   a      Atag cnnnnnnnnn
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C
                     T + G
                     T - A          T T
                    T     T T T T C     A
      T A A        A      + | | | |     G
    T       C T C A       G A A A G     C
    G       | | | |                 T T
    G       G A G T
      T A          G     AAGTT
                    T - A
                    T - A
                    G - C
                    T - A
                    G - C
                  T       C
                  T       G
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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