The detailed information of tRNA gene sequence


Sequence ID>SRA1001133
Genome IDSRR001052.197462
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 106
End posion on genome 35
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
nnnngagaat
tRNA gene sequence 
GTGTCTGTAACCTAATTGGGAAGGTGTCTGTTTTCGGAATAGGCAATAAGGGTTCGAGCC
CCTTTGGGCATTgtg
Downstream region at tRNA end position 
ttttatgaat
Secondary structure (Cloverleaf model)
>SRA1001133	Arg	TCG
                   t      Tgtg ttttatgaat
                     G + T
                     T - A
                     G - C
                     T + G
                     C - G
                     T + G
                     G + T          C G
                    T     T T C C C     A
      T A A        A      | | | | |     G
    T       T C C A       A A G G G     C
    G       | | | |                 T T
    G       A G G T
      G A          G     CAAT
                    T + G
                    C - G
                    T - A
                    G + T
                    T - A
                  T       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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