The detailed information of tRNA gene sequence


Sequence ID>SRA1001177
Genome IDSRR001052.279531
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 15
End posion on genome 86
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatccgtccg
tRNA gene sequence 
GGGGTTATAATTTAAAAGGCAAAATAGTCGGTTGTCATCCGATTAATGTGGGTTCAATTC
CTGTTAATCCCGaat
Downstream region at tRNA end position 
tataaaatgg
Secondary structure (Cloverleaf model)
>SRA1001177	Asp	GTC
                   g      Gaat tataaaatgg
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     A - T          T T
                    T     T G T C C     A
      A A A        A      + + + | |     A
    A       T T T A       G T G G G     C
    G       | | | |                 T T
    G       A A A T
      C A          A     TAAT
                    G + T
                    T - A
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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