The detailed information of tRNA gene sequence


Sequence ID>SRA1001190
Genome IDSRR001052.309521
Search identical group
Phylum/ClassCorals, microbial fraction from Porites astreoides tissues (SRP000144)
Species
Start position on genome 10
End posion on genome 82
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ntttataatc
tRNA gene sequence 
GCCTGTTTAGCTTAATTGGTAAAGTATACTGCTCATGANAGTAATTATAAAAGTTCAAGT
CTTTTGATAGGTAagt
Downstream region at tRNA end position 
agtaaatggn
Secondary structure (Cloverleaf model)
>SRA1001190	Met	CAT
                   c      Aagt agtaaatggn
                     G + T
                     C - G
                     C - G
                     T - A
                     G + T
                     T - A
                     T + G          T G
                    T     T T T T C     A
      T A A        A      | | | | |     A
    T       T T C G       A A A A G     C
    G       | | | +                 T T
    G       A A G T
      T A          A     ATTAT
                    T - A
                    A - T
                    C - G
                    T - A
                    G   N
                  C       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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