The detailed information of tRNA gene sequence


Sequence ID>SRA1001212
Genome IDSRR001053.24005
Search identical group
Phylum/ClassSolar Salterns, viral fraction from low salinity saltern in San Diego, CA (SRP000145)
Species
Start position on genome 30
End posion on genome 105
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
taactgtgac
tRNA gene sequence 
GCCGCTTTAGCTCAGCCGGTAGAGCAACTGATTTGTAATCAGTAGGTCCGCGGTTCGAAT
CCGTGAAGCGGCACCA
Downstream region at tRNA end position 
tannnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001212	Thr	TGT
                   c      ACCA tannnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T A
                    T     G T G C C     A
      C G A        A      | + | | |     G
    C       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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