The detailed information of tRNA gene sequence


Sequence ID>SRA1001229
Genome IDSRR001056.7854
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 88
End posion on genome 15
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agatcaccaa
tRNA gene sequence 
TGACCGATAGTTCAGTCGGTAGAACGGGTGACTGTTAATCACTATGTCGCAGGTTCGAGT
CCTGCTCGGGCAGCac
Downstream region at tRNA end position 
atccggtgtg
Secondary structure (Cloverleaf model)
>SRA1001229	Asn	GTT
                   a      GCac atccggtgtg
                     T - A
                     G - C
                     A   G
                     C - G
                     C - G
                     G - C
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T T G       G C A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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