The detailed information of tRNA gene sequence


Sequence ID>SRA1001232
Genome IDSRR001056.17647
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 13
End posion on genome 88
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attaaatatt
tRNA gene sequence 
GCGCTCGTGGCCAAACGGATAAGGCAACAGACTTCTAATCTGTAGACTGCAGGTTCGATT
CCTGCCGAGCGCGCCA
Downstream region at tRNA end position 
cacattgggc
Secondary structure (Cloverleaf model)
>SRA1001232	Arg	TCT
                   t      GCCA cacattgggc
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T T
                    T     C G T C C     A
      C A A        G      | | | | |     G
    G       A C C G       G C A G G     C
    G         | | |                 T T
    A       A G G C
      T A          A     AGACT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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