The detailed information of tRNA gene sequence


Sequence ID>SRA1001237
Genome IDSRR001056.31004
Search identical group
Phylum/ClassSolar Salterns, viral fraction from medium salinity saltern in San Diego, CA (SRP000146)
Species
Start position on genome 37
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggccaatcac
tRNA gene sequence 
GGTGACGTAGTTCAGCGGTAGAACAGCAGATTCATGATCTGTAAGTCGCAGGTTCAAATC
CTGCCGTCACCCnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001237	Met	CAT
                   c      Cnnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C G T C C     A
        G A        A      | | | | |     A
      C     C T T G       G C A G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     AAGTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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