The detailed information of tRNA gene sequence


Sequence ID>SRA1001241
Genome IDSRR001057.8845
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000147)
Species
Start position on genome 86
End posion on genome 12
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccaaaata
tRNA gene sequence 
TGGGCCATAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGTCGTCGGTTCGATCC
CGACTGGCTCCACCA
Downstream region at tRNA end position 
gtccatacag
Secondary structure (Cloverleaf model)
>SRA1001241	Ala	TGC
                   a      ACCA gtccatacag
                     T   C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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