The detailed information of tRNA gene sequence


Sequence ID>SRA1001244
Genome IDSRR001058.5326
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000147)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position
nattaaaatt
tRNA gene sequence
ACCTCCTTAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCCTTGGTTCGAG
TCCAAGAGGAGGAGCAA
Downstream region at tRNA end position
ctgataatta
Secondary structure (Cloverleaf model)
>SRA1001244	Asn	GTT
                   t      GCAA ctgataatta
                     A   A
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     G A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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