The detailed information of tRNA gene sequence


Sequence ID>SRA1001249
Genome IDSRR001059.2527
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 11
End posion on genome 84
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggttgtaccg
tRNA gene sequence 
GGGCTCGTGGTCTAGTGGTCATGACGCTTCCCTTACAAGGAAGAAACCGGCGGTTCAACT
CCGCCCGAGCCCACtc
Downstream region at tRNA end position 
acgtcgtcca
Secondary structure (Cloverleaf model)
>SRA1001249	Val	TAC
                   g      ACtc acgtcgtcca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C G C C     A
      T G A        G      | | | | |     A
    G       T C T G       G G C G G     C
    G         | | |                 T T
    T       T G A C
      C A          G     AAACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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