The detailed information of tRNA gene sequence


Sequence ID>SRA1001251
Genome IDSRR001059.9714
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 20
End posion on genome 93
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ggatgcaccg
tRNA gene sequence 
GGGCTCGTGGTCTAGTGGTCATGACGCTTCCCTTACAAGGAAGAGGCCGGCGGTTCAACT
CCGCCCGAGCCCACtc
Downstream region at tRNA end position 
acgtcgtcca
Secondary structure (Cloverleaf model)
>SRA1001251	Val	TAC
                   g      ACtc acgtcgtcca
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T C
                    T     C C G C C     A
      T G A        G      | | | | |     A
    G       T C T G       G G C G G     C
    G         | | |                 T T
    T       T G A C
      C A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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