The detailed information of tRNA gene sequence


Sequence ID>SRA1001256
Genome IDSRR001060.8405
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 14
End posion on genome 90
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
agtaagatgt
tRNA gene sequence 
GCGCTCGTAGCTCAGCTGGATAGAGTACCTGGCTACGAACCAGGCGGTCGGAGGTTCGAA
TCCTCCCGAGCGCACCA
Downstream region at tRNA end position 
cttggaaatt
Secondary structure (Cloverleaf model)
>SRA1001256	Arg	ACG
                   t      ACCA cttggaaatt
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     CGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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