The detailed information of tRNA gene sequence


Sequence ID>SRA1001260
Genome IDSRR001060.11107
Search identical group
Phylum/ClassSolar Salterns, microbial fraction from medium salinity saltern in San Diego, CA (SRP000148)
Species
Start position on genome 97
End posion on genome 12
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cattatttat
tRNA gene sequence 
GCCCGGATGGCGGAACTGGTAGACGCACAGGACTTAAAATCCTGGGGCTTTTAGCCGTGT
GGGTTCGAGTCCCACTCCGGGCACCA
Downstream region at tRNA end position 
ttcataatgg
Secondary structure (Cloverleaf model)
>SRA1001260	Leu	TAA
                   t      ACCA ttcataatgg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     GGGCTTTTAGCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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