The detailed information of tRNA gene sequence


Sequence ID>SRA1001278
Genome IDSRR001062.162049
Search identical group
Phylum/ClassStromatolites, microbial fraction from Highborne Cay microbiolite in the Bahamas (SRP000150)
Species
Start position on genome 6
End posion on genome 82
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
nnnnnggcga
tRNA gene sequence 
GGGCCGGTAGCTCAGTCCGGCAGAGCATCTGACTCTTAATCAGACGGTCGCGCGTTCAAA
TCGCGTCCGGCCCGTCA
Downstream region at tRNA end position 
atcggtgaac
Secondary structure (Cloverleaf model)
>SRA1001278	Lys	CTT
                   a      GTCA atcggtgaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T G C G C     A
      T G A        A      + | | | |     A
    C       C T C G       G C G C G     C
    C       | | | |                 T T
    G       G A G C
      G C A        A     CGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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