The detailed information of tRNA gene sequence


Sequence ID>SRA1001296
Genome IDSRR001063.27863
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 109
End posion on genome 19
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
nnnctttctt
tRNA gene sequence
GGAAGAGTGCCGGAGCGGTTAACGGAACAGGTTGCTAACCTGTGATCGCCTTATACGCGA
TCCGTGGGTTCGAATCCCACCTCTTCCGCCA
Downstream region at tRNA end position
atagaaactt
Secondary structure (Cloverleaf model)
>SRA1001296	Ser	GCT
                   t      GCCA atagaaactt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T A          A     GATCGCCTTATACGCGATCC
                    A - T
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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