The detailed information of tRNA gene sequence


Sequence ID>SRA1001300
Genome IDSRR001063.48375
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 107
End posion on genome 34
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnnncga
tRNA gene sequence 
TCCCCTGTAGCTCAGTCGGTAGAGCAGGCGGCTGTTAACCGCCTTGTCGCAGGTTCGAGT
CCTGCCGGGGGAGCtt
Downstream region at tRNA end position 
tcgtcaaatt
Secondary structure (Cloverleaf model)
>SRA1001300	Asn	GTT
                   a      GCtt tcgtcaaatt
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TTGTC
                    G - C
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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