The detailed information of tRNA gene sequence


Sequence ID>SRA1001306
Genome IDSRR001063.71573
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 109
End posion on genome 17
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnncgtgc
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACGGCTTATCCCC
GTATCGCGGGTTCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttcaaaag
Secondary structure (Cloverleaf model)
>SRA1001306	Ser	GGA
                   c      GCCA gtttcaaaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACGGCTTATCCCCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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