The detailed information of tRNA gene sequence


Sequence ID>SRA1001341
Genome IDSRR001063.231582
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 13
End posion on genome 88
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttgttcacat
tRNA gene sequence
CGCGGGATAGAGCAGTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCACTGGTTCGAGT
CCAGTTCCCGCTACAA
Downstream region at tRNA end position
ggattattcc
Secondary structure (Cloverleaf model)
>SRA1001341	Met	CAT
                   t      ACAA ggattattcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    A       C G A G       A C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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