The detailed information of tRNA gene sequence


Sequence ID>SRA1001342
Genome IDSRR001063.232246
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 110
End posion on genome 24
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nntactgagc
tRNA gene sequence 
GCCGAGGTGGCGGAATCGGTAGACGCGCCGGATTCAAAATCCGGTGGGGGCAACCCCATG
AGGGTTCAATTCCCTCCCTCGGCACCA
Downstream region at tRNA end position 
ttattcatta
Secondary structure (Cloverleaf model)
>SRA1001342	Leu	CAA
                   c      ACCA ttattcatta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    T     C T C C C     A
      T A A        G      | | | | |     A
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGGGCAACCCCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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