The detailed information of tRNA gene sequence


Sequence ID>SRA1001345
Genome IDSRR001063.241007
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 32
End posion on genome 107
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtcagtactc
tRNA gene sequence 
GGGCGAGTCGTCTAGCCTGGTCTTGGACATTGCTCTCACACAGCAAAGGTCGAGGGTTCG
AATCCCTCCTCGCCCAtan
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001345	Val	CAC
                   c      Atan nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       G A G G G     C
  G         + | | |                 T T
  G         G G A C
    T C T T        A     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    T - A
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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