The detailed information of tRNA gene sequence


Sequence ID>SRA1001355
Genome IDSRR001063.299283
Search identical group
Phylum/ClassStromatolites, microbial fraction from Pozas Azules II stromatolite in Mexico (SRP000151)
Species
Start position on genome 34
End posion on genome 110
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcccctgaac
tRNA gene sequence 
GGGTCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAC
TCCTCCTCGACCCACCA
Downstream region at tRNA end position 
ttcccccgcc
Secondary structure (Cloverleaf model)
>SRA1001355	Ile	GAT
                   c      ACCA ttcccccgcc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     G + T          T C
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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