The detailed information of tRNA gene sequence


Sequence ID>SRA1001367
Genome IDSRR001064.13838
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 112
End posion on genome 35
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnncggaaT
tRNA gene sequence 
TCCCAAATAGCTCAGTTGGTTAGAGCATCTGACTGTTAATCAGAGGGTCGCTGGTTCAAG
TCCAGCTTTGGGAGACA
Downstream region at tRNA end position 
aaaaaaatac
Secondary structure (Cloverleaf model)
>SRA1001367	Asn	GTT
                   T      GACA aaaaaaatac
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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