The detailed information of tRNA gene sequence


Sequence ID>SRA1001368
Genome IDSRR001064.15648
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 87
End posion on genome 13
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
acaatggctt
tRNA gene sequence 
GCTGCGGTAGCTCAGTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCGAGAGTTCAATCC
TCTCTCGCAGCACCA
Downstream region at tRNA end position 
tttaatatca
Secondary structure (Cloverleaf model)
>SRA1001368	Thr	GGT
                   t      ACCA tttaatatca
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T          C T
                    T     C T C T C     A
        G A        A      | | | | |     A
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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