The detailed information of tRNA gene sequence


Sequence ID>SRA1001371
Genome IDSRR001064.34052
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 10
End posion on genome 87
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
naccgcgtgt
tRNA gene sequence 
CGGGCCATAGCGCAGTCTGGTTAGCGCGTCCGTCTGGGGGGCGGGAGGTCGAGAGTTCGA
ATCTCTCTGGCCCGACCA
Downstream region at tRNA end position 
ttatcaaaac
Secondary structure (Cloverleaf model)
>SRA1001371	Pro	GGG
                   t      ACCA ttatcaaaac
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     C T C T C     A
    C T G A        A      | | | | |     G
  T         C G C G       G A G A G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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