The detailed information of tRNA gene sequence


Sequence ID>SRA1001376
Genome IDSRR001064.46659
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 42
End posion on genome 116
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
taacttataA
tRNA gene sequence 
GCGGGAGTAGCTCAGTCGGTAGAGCATCAGCCTTCCAAGCTGAGGGTCGCGGGTTCGAGT
CTCGTCTCCCGCTGnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001376	Gly	TCC
                   A      TGnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | + |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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