The detailed information of tRNA gene sequence


Sequence ID>SRA1001381
Genome IDSRR001064.56475
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 29
End posion on genome 104
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agttccaaaa
tRNA gene sequence 
CGGAGTTTAGCGCAGTTGGTAGCGCGCTACGTTCGGGACGTAGAGGTCGGGCGTTCGAAT
CGCCTAACTCCGACAA
Downstream region at tRNA end position 
aaaaaggaag
Secondary structure (Cloverleaf model)
>SRA1001381	Pro	CGG
                   a      ACAA aaaaaggaag
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     T - A          T A
                    T     T C C G C     A
      T G A        A      + | | | |     G
    T       C G C G       G G G C G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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