The detailed information of tRNA gene sequence


Sequence ID>SRA1001384
Genome IDSRR001064.66039
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gaaattattt
tRNA gene sequence
CGTGTGGTAGAGCAGTTGGTTAGCTTGCTGGACTCATAATCCAGAGGTCGGAGGTTCGAG
TCCTCCCCACGCAACTA
Downstream region at tRNA end position
aaataaacca
Secondary structure (Cloverleaf model)
>SRA1001384	Met	CAT
                   t      ACTA aaataaacca
                     C   A
                     G - C
                     T + G
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | +                 T T
    G       G C T T
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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