The detailed information of tRNA gene sequence


Sequence ID>SRA1001385
Genome IDSRR001064.79373
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 17
End posion on genome 92
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atttagttat
tRNA gene sequence 
CGGGGTGTAGTACAGTTGGTAGTATGCCTGGTTTGGGACCAGGAGGTCGTCAGTTCGAGT
CTGGCCACCCCGACAA
Downstream region at tRNA end position 
aaatacaaan
Secondary structure (Cloverleaf model)
>SRA1001385	Pro	TGG
                   t      ACAA aaatacaaan
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G G T C     A
      T G A        A      | + | | |     G
    T       C A T G       G T C A G     C
    G       | | | +                 T T
    G       G T A T
      T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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