The detailed information of tRNA gene sequence


Sequence ID>SRA1001388
Genome IDSRR001064.90578
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 31
End posion on genome 105
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ctgtgaatgt
tRNA gene sequence 
TCCTCGGTAGCTCAGTGGTAGAGCAAGCGGCTGTTAACCGCTTGGTCGCTGGTTCGAATC
CGGCCCGGGGAGCCA
Downstream region at tRNA end position 
tttaannnnn
Secondary structure (Cloverleaf model)
>SRA1001388	Asn	GTT
                   t      GCCA tttaannnnn
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C G G C C     A
        G A        A      | | + | |     G
      T     C T C G       G C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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