The detailed information of tRNA gene sequence


Sequence ID>SRA1001404
Genome IDSRR001064.156059
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 88
End posion on genome 11
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
tttaaaaaaa
tRNA gene sequence 
GGGCGCATAGCTCAGCTGGTTCAGAGCACCTGCCTTACAAGCAGGGGGTCCGCGGTTCGA
ACCCGTGTGCGCCCACAA
Downstream region at tRNA end position 
agtcccgata
Secondary structure (Cloverleaf model)
>SRA1001404	Val	TAC
                   a      ACAA agtcccgata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          C A
                    T     G T G C C     A
    T C G A        A      | + | | |     G
  G         C T C G       C G C G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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