The detailed information of tRNA gene sequence


Sequence ID>SRA1001406
Genome IDSRR001064.162770
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gcactactct
tRNA gene sequence 
GGTTCGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGTACCGCAA
Downstream region at tRNA end position 
aagcagttca
Secondary structure (Cloverleaf model)
>SRA1001406	Asp	GTC
                   t      GCAA aagcagttca
                     G - C
                     G - C
                     T - A
                     T   T
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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