The detailed information of tRNA gene sequence


Sequence ID>SRA1001423
Genome IDSRR001064.245726
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 98
End posion on genome 22
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaagaaacat
tRNA gene sequence 
TCCTCAATAGCTCAGCTGGTTAGAGCGACTGACTGTTAATCAGTAGGTCCCTGGTTCAAG
TCCAGGTTGGGGAGCAA
Downstream region at tRNA end position 
aaacctacca
Secondary structure (Cloverleaf model)
>SRA1001423	Asn	GTT
                   t      GCAA aaacctacca
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     A - T
                     A - T          T G
                    T     G G A C C     A
      C G A        A      | | | | |     A
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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