The detailed information of tRNA gene sequence


Sequence ID>SRA1001428
Genome IDSRR001064.265091
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 123
End posion on genome 47
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
nttaaaacct
tRNA gene sequence
GGTTCGGTAGTTCAGTTGGTTAGAATGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCCGTACCGCAA
Downstream region at tRNA end position
aacaccctat
Secondary structure (Cloverleaf model)
>SRA1001428	Asp	GTC
                   t      GCAA aacaccctat
                     G - C
                     G - C
                     T - A
                     T   T
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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