The detailed information of tRNA gene sequence


Sequence ID>SRA1001430
Genome IDSRR001064.271186
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 114
End posion on genome 39
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ncactccccc
tRNA gene sequence 
GGGACGGTAGCTCAACTGGAAGAGCACCCGGCTTAAGTCGGGAAGGTTCCGGGTTCGAAT
CCCGGCCGTCCTGCCG
Downstream region at tRNA end position 
gcagtgttgg
Secondary structure (Cloverleaf model)
>SRA1001430	Leu	TAA
                   c      GCCG gcagtgttgg
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C A A        A      | | | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     AGGTT
                    C   A
                    C - G
                    C - G
                    G   G
                    G - C
                  C       T
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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