The detailed information of tRNA gene sequence


Sequence ID>SRA1001436
Genome IDSRR001064.305612
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 95
End posion on genome 21
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
cccacggagt
tRNA gene sequence 
GCGGGCATAGCTCAGTGGTAGAGCGTCTCCTTGCCAAGGAGAAGGTCGCGGGTTCGAATC
TCGTTGCCCGCTCCA
Downstream region at tRNA end position 
aagtttaagg
Secondary structure (Cloverleaf model)
>SRA1001436	Gly	GCC
                   t      TCCA aagtttaagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     T G C T C     A
        G A        A      + | | + |     G
      T     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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