The detailed information of tRNA gene sequence


Sequence ID>SRA1001438
Genome IDSRR001064.315436
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from tilapia pond at Kent SeaTech (Salton Sea, CA) (SRP000152)
Species
Start position on genome 131
End posion on genome 58
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position
nnnnnnnntc
tRNA gene sequence
GCGAAAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGGGTTCGAGT
CCCGTTTTTCGCTCtt
Downstream region at tRNA end position
gaaatttaaa
Secondary structure (Cloverleaf model)
>SRA1001438	Gly	GCC
                   c      TCtt gaaatttaaa
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T
                     A - T          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G - C
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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