The detailed information of tRNA gene sequence


Sequence ID>SRA1001479
Genome IDSRR001066.15607
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000154)
Species
Start position on genome 24
End posion on genome 99
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttatctttat
tRNA gene sequence 
GCCGTTGTAGCTCAACTGGTAGAGCAACTGACTTGTAATCAGTAGGTTGGGGGTTCAAGT
CCTCTCGACGGCACCA
Downstream region at tRNA end position 
ttttcatggt
Secondary structure (Cloverleaf model)
>SRA1001479	Thr	TGT
                   t      ACCA ttttcatggt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     T + G
                     G - C          T G
                    T     T C T C C     A
      C A A        A      + | + | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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