The detailed information of tRNA gene sequence


Sequence ID>SRA1001485
Genome IDSRR001066.34566
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from gut contents of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000154)
Species
Start position on genome 87
End posion on genome 12
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgaccgtttt
tRNA gene sequence 
GTCCCCTTCGTCTAGAGGCCTAGGACATCACCCTTTCACGGTGAGTACGGGGGTTCGAAT
CCCCCAGGGGACGCCA
Downstream region at tRNA end position 
aataaaaaag
Secondary structure (Cloverleaf model)
>SRA1001485	Glu	TTC
                   t      GCCA aataaaaaag
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     C C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     GTAC
                    T - A
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK