The detailed information of tRNA gene sequence


Sequence ID>SRA1001490
Genome IDSRR001067.4961
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 93
End posion on genome 17
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
caagttgcgt
tRNA gene sequence 
AGGGGAATCGCCAAGCTGGTTAAGGCACCGGATTTTGATTCCGGCATTCCAAGGTTCGAA
TCCTTGTTCCCCTGCCA
Downstream region at tRNA end position 
tttaattcgg
Secondary structure (Cloverleaf model)
>SRA1001490	Gln	TTG
                   t      GCCA tttaattcgg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     G T T C C     A
      C G A        C      | | | | |     G
    T       A C C G       C A A G G     C
    G         | | |                 T T
    G       A G G C
      T T A        A     CATTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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