The detailed information of tRNA gene sequence


Sequence ID>SRA1001497
Genome IDSRR001067.20516
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 89
End posion on genome 15
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
ttttgagttt
tRNA gene sequence
GGCCCGTTGGTCAAGTGGTTAAGACACCTCCCTTTCACGGAGGTAACAGGGGTTCGAGTC
CCCTACGGGTCACCA
Downstream region at tRNA end position
ataatcccca
Secondary structure (Cloverleaf model)
>SRA1001497	Glu	TTC
                   t      ACCA ataatcccca
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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