The detailed information of tRNA gene sequence


Sequence ID>SRA1001502
Genome IDSRR001067.33458
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 33
End posion on genome 108
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tttttttatt
tRNA gene sequence 
TGGGAAATAGCTTAATTTGGTAGAGCACTTAGTTTGGGTCTAAGGGTTGCAGGTTCAAGT
CCTGTTTTTCCAACCA
Downstream region at tRNA end position 
aatatgagat
Secondary structure (Cloverleaf model)
>SRA1001502	Pro	TGG
                   t      ACCA aatatgagat
                     T - A
                     G - C
                     G - C
                     G + T
                     A - T
                     A - T
                     A - T          T G
                    T     T G T C C     A
      T A A        A      + | | | |     A
    T       T T C G       G C A G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        A     GGTT
                    C - G
                    T - A
                    T - A
                    A - T
                    G - C
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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