The detailed information of tRNA gene sequence


Sequence ID>SRA1001511
Genome IDSRR001067.50965
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 35
End posion on genome 108
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
gggtcggtcT
tRNA gene sequence 
CTCGCCGTAGCACAATGGATAGTGCACGCGCCTCCTAAGCGTGAGATACAGGTTCGATTC
CTGTCGGCGGGACnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001511	Arg	CCT
                   T      ACnn nnnnnnnnnn
                     C - G
                     T + G
                     C - G
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T G T C C     A
      T A A        A      | | | | |     G
    G       C A C G       A C A G G     C
    G       | | | |                 T T
    A       G T G C
      T A          A     AGAT
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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