The detailed information of tRNA gene sequence


Sequence ID>SRA1001512
Genome IDSRR001067.52235
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish showed no sign of disease (SRP000155)
Species
Start position on genome 34
End posion on genome 109
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
gcggtctttc
tRNA gene sequence
GGGTCGTTAGCTCAGCTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCAGGTTCGAAT
CCCGCACGGCCTACCA
Downstream region at tRNA end position
cgaannnnnn
Secondary structure (Cloverleaf model)
>SRA1001512	Lys	TTT
                   c      ACCA cgaannnnnn
                     G + T
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        A      | |   | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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