The detailed information of tRNA gene sequence


Sequence ID>SRA1001522
Genome IDSRR001068.17562
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156)
Species
Start position on genome 99
End posion on genome 26
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
caaactacgT
tRNA gene sequence 
TGGGGATTAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATGCCAAGGTTCAAATC
CTTGATCCCCAGTat
Downstream region at tRNA end position 
tacacccata
Secondary structure (Cloverleaf model)
>SRA1001522	Gln	TTG
                   T      GTat tacacccata
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     G T T C C     A
        G A        A      | | | | |     A
      C     A C C G       C A A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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