The detailed information of tRNA gene sequence


Sequence ID>SRA1001526
Genome IDSRR001068.32545
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156)
Species
Start position on genome 24
End posion on genome 98
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tattcatatg
tRNA gene sequence 
GCGGTCGTGGCGAAGGGGTTAACGCACTGGTTTGTGGATCCAGCATTCGCGGGTTCAAGT
CCCGTCGTCCGCCCAt
Downstream region at tRNA end position 
tatttttcta
Secondary structure (Cloverleaf model)
>SRA1001526	His	GTG
                   g      CCAt tatttttcta
                     G - C
                     C - G
                     G - C
                     G - C
                     T   T
                     C - G
                     G - C          T G
                    T     T G C C C     A
      G G A        G      + | | | |     A
    G       A G C G       G C G G G     C
    G         | | |                 T T
    T       A C G C
      T A          A     CATTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T   T
                  T       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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