The detailed information of tRNA gene sequence


Sequence ID>SRA1001527
Genome IDSRR001068.41741
Search identical group
Phylum/ClassTilapia Farm, microbial fraction from slime layer of hybrid striped bass from Kent SeaTech (Salton Sea, CA); fish were sick at time of sampling (SRP000156)
Species
Start position on genome 71
End posion on genome -1
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cggaaataaa
tRNA gene sequence 
GGCCCGTTGGTCAAGTGGTTAAGACACCTCCCTTTCACGGAGGTAACAGGGGTTCGAGTC
CCCTACGGGTCNNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1001527	Glu	TTC
                   a      NNnn nnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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